Publications

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Thessen AE, Marvel S, Achenbach JC, Fischer S, Haendel MA, Hayward K, Klüver N, Könemann S, Legradi J, Lein PJ, Leong C, Muriana A, Mylroie JE, Padilla A, Perone D, Planchart A, Miñana Prieto R, Quevedo C, Reif DM, Ryan K, Stinckens E, Truong L, Vergauwen L, Vom Berg C, Wilbanks M, Yaghoobi B, Hamm J. Implementation of Zebrafish Ontologies for Toxicology Screening. Frontiers Tox. 2022. In press.

House JS, Hall J, Park SS, Planchart A, Money E, Maguire RL, Huang Z, Mattingly CJ, Skaar D, Tzeng JY, Darrah TH, Vengosh A, Murphy SK, Jirtle RL, Hoyo C. Cadmium exposure and MEG3 methylation differences between Whites and African Americans in the NEST Cohort. Environ Epigenet. 2019 Aug 29;5(3):dvz014. doi: 10.1093/eep/dvz014. PMID: 31528362; PMCID: PMC6736358.

Kosnik MB, Planchart A, Marvel SW, Reif DM, Mattingly CJ. Integration of curated and high-throughput screening data to elucidate environmental influences on disease pathways. Comput Toxicol. 2019 Nov;12:100094. doi: 10.1016/j.comtox.2019.100094. PMID: 31453412; PMCID: PMC6709694.

Hamm JT, Ceger P, Allen D, Stout M, Maull EA, Baker G, Zmarowski A, Padilla S, Perkins E, Planchart A, Stedman D, Tal T, Tanguay RL, Volz DC, Wilbanks MS, Walker NJ. Characterizing sources of variability in zebrafish embryo screening protocols. ALTEX. 2019;36(1):103-120. doi: 10.14573/altex.1804162. PMID: 30415271.

Green AJ, Hoyo C, Mattingly CJ, Luo Y, Tzeng JY, Murphy SK, Buchwalter DB, Planchart A. Cadmium exposure increases the risk of juvenile obesity: a human and zebrafish comparative study. Int J Obes (Lond). 2018 Jul;42(7):1285-1295. doi: 10.1038/s41366-018-0036-y. PMID: 29511319; PMCID: PMC6054604.

Planchart A, Green A, Hoyo C, Mattingly CJ. Heavy Metal Exposure and Metabolic Syndrome: Evidence from Human and Model System Studies. Curr Environ Health Rep. 2018 Mar;5(1):110-124. doi: 10.1007/s40572-018-0182-3. PMID:29460222; PMCID: PMC6053628.

Green AJ, Planchart A. The neurological toxicity of heavy metals: A fish perspective. Comp Biochem Physiol C Toxicol Pharmacol. 2018 Jun;208:12-19. doi: 10.1016/j.cbpc.2017.11.008. PMID: 29199130; PMCID: PMC5936656.

Green AJ, Mattingly CJ, Planchart A. Cadmium Disrupts Vestibular Function by Interfering with Otolith Formation. BioRxiv. 2017. doi: 10.1101/162347.

Watson AT, Planchart A, Mattingly CJ, Winkler C, Reif DM, Kullman SW. From the Cover: Embryonic Exposure to TCDD Impacts Osteogenesis of the Axial Skeleton in Japanese medaka, Oryzias latipes. Toxicol Sci. 2017 Feb;155(2):485-496. doi: 10.1093/toxsci/kfw229. PMID: 28077779; PMCID: PMC5291214.

Planchart A, Mattingly CJ, Allen D, Ceger P, Casey W, Hinton D, Kanungo J, Kullman SW, Tal T, Bondesson M, Burgess SM, Sullivan C, Kim C, Behl M, Padilla S, Reif DM, Tanguay RL, Hamm J. Advancing toxicology research using in vivo high throughput toxicology with small fish models. ALTEX. 2016;33(4):435-452. doi: 10.14573/altex.1601281. PMID: 27328013; PMCID: PMC5270630.

Arambula SE, Belcher SM, Planchart A, Turner SD, Patisaul HB. Impact of Low Dose Oral Exposure to Bisphenol A (BPA) on the Neonatal Rat Hypothalamic and Hippocampal Transcriptome: A CLARITY-BPA Consortium Study. Endocrinology. 2016 Oct; 157(10):3856-3872. doi: 10.1210/en.2016-1339. PMID: 27571134; PMCID: PMC5045502.

Schilling J, Nepomuceno AI, Planchart A, Yoder JA, Kelly RM, Muddiman DC, Daniels HV, Hiramatsu N, Reading BJ. Machine learning reveals sex-specific 17β-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins. Proteomics. 2015 Aug;15(15):2678-90. doi: 10.1002/pmic.201400606. PMID: 25900664; PMCID: PMC5765861.

Bugel SM, Tanguay RL, Planchart A. Zebrafish: A marvel of high-throughput biology for 21st century toxicology. Curr Environ Health Rep. 2014 Sep 7;1(4):341-352. doi: 10.1007/s40572-014-0029-5. PMID: 25678986; PMCID: PMC4321749.

Planchart A. Analysis of an intronic promoter within Synj2. Biochem Biophys Res Commun. 2013 Nov 1;440(4):640-5. doi: 10.1016/j.bbrc.2013.09.115. PMID: 24103750; PMCID: PMC5761313.

Cheng KC, Hinton DE, Mattingly CJ, Planchart A. Aquatic models, genomics and chemical risk management. Comp Biochem Physiol C Toxicol Pharmacol. 2012 Jan;155(1):169-73. doi: 10.1016/j.cbpc.2011.06.009. PMID: 21763781; PMCID: PMC4104604.

Planchart A, Mattingly CJ. 2,3,7,8-Tetrachlorodibenzo-p-dioxin upregulates FoxQ1b in zebrafish jaw primordium. Chem Res Toxicol. 2010 Mar 15;23(3):480-7. doi: 10.1021/tx9003165. PMID: 20055451; PMCID: PMC2839046.

Mattingly CJ, Hampton TH, Brothers KM, Griffin NE, Planchart A. Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos. Environ Health Perspect. 2009 Jun;117(6):981-7. doi: 10.1289/ehp.0900555. PMID: 19590694; PMCID: PMC2702417.

Coffman JA, Coluccio A, Planchart A, Robertson AJ. Oral-aboral axis specification in the sea urchin embryo III. Role of mitochondrial redox signaling via H2O2. Dev Biol. 2009 Jun 1;330(1):123-30. doi: 10.1016/j.ydbio.2009.03.017. PMID: 19328778; PMCID:
PMC2748885.

Doukeris CE, Planchart A. Characterization of a Novel DNA Motif in the Tctex1 and TCP10 Gene Complexes and its Prevalence in the Mouse Genome. Adv Biol Res (Rennes). 2007;1(1-2):1-16. PMID: 20514145; PMCID: PMC2877517.

Schlax PE, Zhang J, Lewis E, Planchart A, Lawson TG. Degradation of the encephalomyocarditis virus and hepatitis A virus 3C proteases by the ubiquitin/26S proteasome system in vivo. Virology. 2007 Apr 10;360(2):350-63. doi: 10.1016/j.virol.2006.10.043. PMID: 17150238.

Schimenti JC, Reynolds JL, Planchart A. Mutations in Serac1 or Synj2 cause proximal t haplotype-mediated male mouse sterility but not transmission ratio distortion. Proc Natl Acad Sci U S A. 2005 Mar 1;102(9):3342-7. doi: 10.1073/pnas.0407970102. PMCID: PMC552908; PMID: 15722415.

Blake JA, et al.; Mouse Genome Database Group. MGD: the Mouse Genome Database. Nucleic Acids Res. 2003 Jan 1;31(1):193-5. doi: 10.1093/nar/gkg047. PMCID: PMC165494; PMID: 12519980.

Blake JA, et al.; Mouse Genome Database Group. The Mouse Genome Database (MGD): the model organism database for the laboratory mouse. Nucleic Acids Res. 2002 Jan 1;30(1):113-5. doi: 10.1093/nar/30.1.113. PMID: 11752269; PMCID: PMC99116.

Planchart A, Schimenti JC. Experimental and computational approaches yield a high-resolution, 1-Mb physical map of the region harboring the mouse t haplotype sterility factor, tcs1. Mamm Genome. 2001 Aug;12(8):668-70. doi: 10.1007/s00335-001-1002-9. PMID: 11471064.

Browning VL, Chaudhry SS, Planchart A, Dixon MJ, Schimenti JC. Mutations of the mouse Twist and sy (fibrillin 2) genes induced by chemical mutagenesis of ES cells. Genomics. 2001 May 1;73(3):291-8. doi: 10.1006/geno.2001.6523. PMID: 11350121.

Planchart A, You Y, Schimenti JC. Physical mapping of male fertility and meiotic drive quantitative trait loci in the mouse t complex using chromosome deficiencies. Genetics. 2000 Jun;155(2):803-12. doi: 10.1093/genetics/155.2.803. PMID: 10835401; PMCID: PMC1461111.

Wang H, Planchart A, Stubbs G. Caspar carboxylates: the structural basis of tobamovirus disassembly. Biophys J. 1998 Jan;74(1):633-8. doi: 10.1016/S0006-3495(98)77822-1. PMID: 9449364; PMCID: PMC1299416.

Wang H, Planchart A, Allen D, Pattanayek R, Stubbs G. Preliminary X-ray diffraction studies of ribgrass mosaic virus. J Mol Biol. 1993 Dec 5;234(3):902-4. doi: 10.1006/jmbi.1993.1639. PMID: 8254685.